diff --git a/.dockerignore b/.dockerignore
index 271516eb50446c9779c3ddec1ef910301cd765ef..4f65c1899ef0a63ef4484ee252f1f911a2649865 100644
--- a/.dockerignore
+++ b/.dockerignore
@@ -1,5 +1,6 @@
config
notes
+dist
.venv
.vscode
.idea
diff --git a/Makefile b/Makefile
index 581febaf6d532839c2139656541db13f6c33733b..bfd1bb4c549db22d9d61b6f579b795badb03379a 100644
--- a/Makefile
+++ b/Makefile
@@ -7,5 +7,5 @@ docker-run:
docker run -it -p 8888:8888 fairnb
docker-save:
- docker save -o tmp/fairnb_image.tar fairnb
- tar -zcvf tmp/fairnb_image.tar.gz tmp/fairnb_image.tar
\ No newline at end of file
+ docker save -o dist/fairnb_image.tar fairnb
+ tar -zcvf dist/fairnb_image.tar.gz tmp/fairnb_image.tar
\ No newline at end of file
diff --git a/README.md b/README.md
index 980c77c825638a65878b899aea46f94c17a8fc27..904f6c65f666c8f34c57ff97efbe4fba407be315 100644
--- a/README.md
+++ b/README.md
@@ -10,19 +10,25 @@ Following packages are additionally needed: git-lfs, libsnfile1 (needed for libr
Install them with your package manager.
To authenticate with the DBRepo and Invenio servers, rename example-config_<platform>.yml located in the config folder
-to config_<platform>.yml and enter you credentials in the placeholders.
+to config_<platform>.yml and enter your credentials in the placeholders. Credentials are not needed for runs done fully locally.
## Usage
The main notebook is located in notebooks/main.ipynb. It executes the full workflow of the project.
Alternatively, notebooks/standalone.ipynb also contains the full workflow.
+
+### Docker
A docker image is also provided for download on invenio, containing a running jupyter instance with all dependencies installed.
+Beware this docker image does not have a config file included and will not be able to authenticate with
+the DBRepo and Invenio servers.
+Therefore, if one wants to execute the notebooks locally, only_local must be set to true in the execute method.
+
## Roadmap & Project Status
The project is done in the context of a bachelor thesis, extensions are not planned for now.
## Contributing
-
+Fork the repository and open a pull request.
## Authors and acknowledgment
Lukas Mahler
diff --git a/fairnb/api/dbrepo.py b/fairnb/api/dbrepo.py
index f7c4a5ce080f5b232a45b7447571eabcd96ff876..a8cebf8121692052d01b34e1f20b9e6c8d14858d 100644
--- a/fairnb/api/dbrepo.py
+++ b/fairnb/api/dbrepo.py
@@ -1,25 +1,18 @@
import pathlib
import logging
+from tusclient import client
from datetime import datetime
from functools import wraps
from typing import Any, Callable
-
-import numpy as np
import requests
import pandas as pd
import csv
from io import StringIO
-
-from decorator import decorator
from keycloak import KeycloakOpenID
LOG = logging.getLogger(__name__)
TIMEOUT = 600
-# TODO: add method to automatically delete table content
-# and replace it with given df
-
-
def re_auth(func: Callable) -> Callable:
@wraps(func)
def inner(self, *args, **kwargs):
@@ -58,12 +51,17 @@ class DBRepoConnector:
self.container_id = container_id
self.database_id = database_id
self.__keycloak_openid = KeycloakOpenID(
- server_url="https://dbrepo1.ec.tuwien.ac.at/api/auth/",
+ server_url=f"{host}/api/auth/",
client_id="dbrepo-client",
realm_name="dbrepo",
client_secret_key=client_secret_key,
)
self.authenticate_keycloak()
+ self.tusclient = client.TusClient(
+ f"{self.host}/api/upload/files/",
+ # headers=self.headers
+ headers={'Content-Type': 'application/offset+octet-stream'}
+ )
def get_token_age(self) -> datetime:
return self.__token_age
@@ -134,13 +132,13 @@ class DBRepoConnector:
mapped_data_types = dataframe.dtypes.astype(str).map(
{
- 'int64': 'number',
- 'int32': 'number',
- 'object': 'text',
- 'float32': 'decimal',
- 'float64': 'decimal',
- 'bool': 'boolean',
- 'datetime64[ns]': 'timestamp',
+ 'int64': {'type': 'int', 'size': 64},
+ 'int32': {'type': 'int', 'size': 64},
+ 'object': {'type': 'text'},
+ 'float32': {'type': 'float', 'size': 24},
+ 'float64': {'type': 'float', 'size': 24},
+ 'bool': {'type': 'bool'},
+ 'datetime64[ns]': {'type': 'timestamp', 'dfid': 1},
}
)
@@ -150,15 +148,14 @@ class DBRepoConnector:
"columns": [
{
"name": column_name,
- "type": mapped_data_types[column_name],
- # "dfid": 0,
- # "unique": False,
+ "type": mapped_data_types[column_name].get('type'),
+ "dfid": mapped_data_types[column_name].get('dfid'),
+ "d": mapped_data_types.get("d"),
+ "enums": mapped_data_types[column_name].get("enums", []),
"primary_key": False,
"null_allowed": False,
- # "date_format": None if mapped_data_types[column_name] == 'timestamp' else None # TODO: add date_format
- # "check_expression": "string",
- # "foreign_key": "string",
- # "enum_values": ["string"]
+ "sets": [],
+ "size": mapped_data_types[column_name].get("size"),
} for column_name in dataframe.columns
],
"constraints": {
@@ -168,10 +165,7 @@ class DBRepoConnector:
}
}
- # add date_format
-
LOG.debug(table)
-
return table
@re_auth
@@ -179,7 +173,7 @@ class DBRepoConnector:
""" Returns the metadata for all tables in the database """
response = requests.get(
- f"{self.host}/api/container/{self.container_id}/database/"
+ f"{self.host}/api/database/"
f"{self.database_id}",
timeout=TIMEOUT,
)
@@ -210,10 +204,11 @@ class DBRepoConnector:
@re_auth
def create_table(self, dataframe: pd.DataFrame, table_name: str, table_descriptor: str):
""" Creates a new table """
+
data = self._create_table_data(dataframe, table_name, table_descriptor)
response = requests.post(
- f"{self.host}/api/container/{self.container_id}/database/{self.database_id}/table",
+ f"{self.host}/api/database/{self.database_id}/table",
json=data,
headers=self.headers
)
@@ -242,38 +237,37 @@ class DBRepoConnector:
def upload_data(self, dataframe: pd.DataFrame, table_id: str):
""" Uploads a Dataframe to specified table """
- split_count = len(dataframe) // 10_000 + 1 # split into chunks of 10k rows
- dfs = np.array_split(dataframe, split_count)
-
- for df in dfs:
- # convert dataframe to a string buffer to make it uploadable
- df.to_csv(string_io := StringIO(), index=False, quoting=csv.QUOTE_ALL)
-
- # upload data to 'frontend' middleware
- response_upload = requests.post(
- f"{self.host}/server-middleware/upload",
- files={"file": string_io.getvalue()},
- headers=self.headers,
- timeout=TIMEOUT
- )
- LOG.debug(response_upload)
-
- if not response_upload.ok:
- LOG.warning(f"Upload for table {table_id} failed: {response_upload}")
+ dataframe.to_csv(
+ string_io := StringIO(),
+ index=False,
+ quoting=csv.QUOTE_ALL)
- upload_location = response_upload.json().get("path")
- LOG.debug(f"Upload location: {upload_location}")
+ uploader = self.tusclient.uploader(
+ file_stream=string_io,
+ chunk_size=1024*2,
+ )
- # move data into table
- response_move = requests.post(
- f"{self.host}/api/container/{self.container_id}/database/{self.database_id}/table/{table_id}/data/import",
- json={"location": upload_location, "quote": '"', "separator": ",", "skip_lines": 1},
- headers=self.headers
- )
- LOG.debug(response_move)
+ upload_url = uploader.create_url()
+ uploader.set_url(upload_url.replace('http', 'https')) # FIX: wrong location response
+ uploader.upload()
+
+ response_upload_import = requests.post(
+ f"{self.host}/api/database/{self.database_id}/table/{table_id}/data/import",
+ json={
+ "false_element": None,
+ "location": f"/tmp/{upload_url.split('/')[-1]}",
+ "null_element": None,
+ "quote": '"',
+ "separator": ",",
+ "skip_lines": 1,
+ "true_element": None
+ },
+ headers=self.headers
+ )
+ LOG.debug(response_upload_import)
- if not response_move.ok:
- LOG.warning(f"Move for table {table_id} failed: {response_move}")
+ if not response_upload_import.ok:
+ LOG.warning(f"Move for table {table_id} failed: {response_upload_import}")
@re_auth
def delete_all_data(self, table_id: str):
@@ -290,7 +284,7 @@ class DBRepoConnector:
def download_page(self, table_id: str, page: int, size: int = 100):
""" Downloads a single page of content of a table """
response = requests.get(
- f"{self.host}/api/container/{self.container_id}/database/{self.database_id}/table/{table_id}"
+ f"{self.host}/api/database/{self.database_id}/table/{table_id}"
f"/data?page={page}&size={size}",
headers=self.headers,
timeout=TIMEOUT
@@ -304,7 +298,7 @@ class DBRepoConnector:
def download_table(self, table_id: str):
""" Downloads a whole table and returns content of downloaded table """
response = requests.get(
- f"{self.host}/api/container/{self.container_id}/database/{self.database_id}/table/{table_id}/export",
+ f"{self.host}/api/database/{self.database_id}/table/{table_id}/export",
headers=self.headers,
timeout=TIMEOUT
)
diff --git a/fairnb/entity/dbrepo_entity.py b/fairnb/entity/dbrepo_entity.py
index ae59e9eb8f9464647b871d1086448b760ab39a2e..b54851f4cadd4b74424854af312de9eb99cef521 100644
--- a/fairnb/entity/dbrepo_entity.py
+++ b/fairnb/entity/dbrepo_entity.py
@@ -71,7 +71,7 @@ class DbRepoEntity(Entity):
self.name,
self.description,
executed_file=executed_file,
- uri=f"{self.dbrepo_connector.host}/api/container/{self.dbrepo_connector.container_id}/database/"
+ uri=f"{self.dbrepo_connector.host}/api/database/"
f"{self.dbrepo_connector.database_id}/table/{self.table_id}",
type=self.type,
platform="dbrepo",
diff --git a/notebooks/3_aggregate_features.ipynb b/notebooks/3_aggregate_features.ipynb
index 2a1646457063b748a64d7fa7711c8f2ae9686943..791cd6c4597793eeeb74329c83f79a9b945d8a2c 100644
--- a/notebooks/3_aggregate_features.ipynb
+++ b/notebooks/3_aggregate_features.ipynb
@@ -5,10 +5,10 @@
"id": "f48a4573",
"metadata": {
"papermill": {
- "duration": 0.002709,
- "end_time": "2023-09-01T11:35:09.037422",
+ "duration": 0.00423,
+ "end_time": "2023-10-08T16:34:18.656322",
"exception": false,
- "start_time": "2023-09-01T11:35:09.034713",
+ "start_time": "2023-10-08T16:34:18.652092",
"status": "completed"
},
"tags": []
@@ -30,19 +30,19 @@
},
"collapsed": true,
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:09.044339Z",
- "iopub.status.busy": "2023-09-01T11:35:09.044011Z",
- "iopub.status.idle": "2023-09-01T11:35:09.306707Z",
- "shell.execute_reply": "2023-09-01T11:35:09.305772Z"
+ "iopub.execute_input": "2023-10-08T16:34:18.667049Z",
+ "iopub.status.busy": "2023-10-08T16:34:18.665614Z",
+ "iopub.status.idle": "2023-10-08T16:34:19.196786Z",
+ "shell.execute_reply": "2023-10-08T16:34:19.195952Z"
},
"jupyter": {
"outputs_hidden": true
},
"papermill": {
- "duration": 0.268336,
- "end_time": "2023-09-01T11:35:09.308546",
+ "duration": 0.541237,
+ "end_time": "2023-10-08T16:34:19.201314",
"exception": false,
- "start_time": "2023-09-01T11:35:09.040210",
+ "start_time": "2023-10-08T16:34:18.660077",
"status": "completed"
},
"tags": []
@@ -61,16 +61,16 @@
"id": "26f640e0",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:09.315577Z",
- "iopub.status.busy": "2023-09-01T11:35:09.314983Z",
- "iopub.status.idle": "2023-09-01T11:35:09.320056Z",
- "shell.execute_reply": "2023-09-01T11:35:09.318932Z"
+ "iopub.execute_input": "2023-10-08T16:34:19.217643Z",
+ "iopub.status.busy": "2023-10-08T16:34:19.215509Z",
+ "iopub.status.idle": "2023-10-08T16:34:19.228093Z",
+ "shell.execute_reply": "2023-10-08T16:34:19.226561Z"
},
"papermill": {
- "duration": 0.010186,
- "end_time": "2023-09-01T11:35:09.321555",
+ "duration": 0.024557,
+ "end_time": "2023-10-08T16:34:19.232363",
"exception": false,
- "start_time": "2023-09-01T11:35:09.311369",
+ "start_time": "2023-10-08T16:34:19.207806",
"status": "completed"
},
"tags": [
@@ -94,19 +94,19 @@
{
"cell_type": "code",
"execution_count": 3,
- "id": "12fd5cf6",
+ "id": "07d5060c",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:09.326762Z",
- "iopub.status.busy": "2023-09-01T11:35:09.326298Z",
- "iopub.status.idle": "2023-09-01T11:35:09.329659Z",
- "shell.execute_reply": "2023-09-01T11:35:09.329117Z"
+ "iopub.execute_input": "2023-10-08T16:34:19.241206Z",
+ "iopub.status.busy": "2023-10-08T16:34:19.240704Z",
+ "iopub.status.idle": "2023-10-08T16:34:19.245612Z",
+ "shell.execute_reply": "2023-10-08T16:34:19.244645Z"
},
"papermill": {
- "duration": 0.007292,
- "end_time": "2023-09-01T11:35:09.330862",
+ "duration": 0.013855,
+ "end_time": "2023-10-08T16:34:19.250049",
"exception": false,
- "start_time": "2023-09-01T11:35:09.323570",
+ "start_time": "2023-10-08T16:34:19.236194",
"status": "completed"
},
"tags": [
@@ -117,10 +117,10 @@
"source": [
"# Parameters\n",
"INPUT_PATHS = {\n",
- " \"raw_features\": \"/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/3_aggregate_features/input/raw_features.csv\"\n",
+ " \"raw_features\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/3_aggregate_features/input/raw_features.csv\"\n",
"}\n",
"OUTPUT_PATHS = {\n",
- " \"aggregated_features\": \"/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/3_aggregate_features/output/features.csv\"\n",
+ " \"aggregated_features\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/3_aggregate_features/output/features.csv\"\n",
"}\n"
]
},
@@ -130,16 +130,16 @@
"id": "c5d9d980",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:09.335772Z",
- "iopub.status.busy": "2023-09-01T11:35:09.335118Z",
- "iopub.status.idle": "2023-09-01T11:35:14.097619Z",
- "shell.execute_reply": "2023-09-01T11:35:14.096620Z"
+ "iopub.execute_input": "2023-10-08T16:34:19.258150Z",
+ "iopub.status.busy": "2023-10-08T16:34:19.257719Z",
+ "iopub.status.idle": "2023-10-08T16:34:28.144700Z",
+ "shell.execute_reply": "2023-10-08T16:34:28.143756Z"
},
"papermill": {
- "duration": 4.766846,
- "end_time": "2023-09-01T11:35:14.099543",
+ "duration": 8.894271,
+ "end_time": "2023-10-08T16:34:28.147607",
"exception": false,
- "start_time": "2023-09-01T11:35:09.332697",
+ "start_time": "2023-10-08T16:34:19.253336",
"status": "completed"
},
"tags": []
@@ -156,16 +156,16 @@
"id": "99f75f47",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:14.106862Z",
- "iopub.status.busy": "2023-09-01T11:35:14.106221Z",
- "iopub.status.idle": "2023-09-01T11:35:18.117596Z",
- "shell.execute_reply": "2023-09-01T11:35:18.116970Z"
+ "iopub.execute_input": "2023-10-08T16:34:28.162103Z",
+ "iopub.status.busy": "2023-10-08T16:34:28.161742Z",
+ "iopub.status.idle": "2023-10-08T16:34:33.823035Z",
+ "shell.execute_reply": "2023-10-08T16:34:33.821652Z"
},
"papermill": {
- "duration": 4.018079,
- "end_time": "2023-09-01T11:35:18.120249",
+ "duration": 5.67462,
+ "end_time": "2023-10-08T16:34:33.826579",
"exception": false,
- "start_time": "2023-09-01T11:35:14.102170",
+ "start_time": "2023-10-08T16:34:28.151959",
"status": "completed"
},
"tags": []
@@ -247,10 +247,10 @@
" <td>-562.85785</td>\n",
" <td>-96.164795</td>\n",
" <td>-219.259016</td>\n",
- " <td>53.561839</td>\n",
+ " <td>53.561838</td>\n",
" <td>-0.772320</td>\n",
" <td>0.029056</td>\n",
- " <td>259.63272</td>\n",
+ " <td>259.63270</td>\n",
" <td>215.094182</td>\n",
" <td>...</td>\n",
" <td>-27.458416</td>\n",
@@ -258,8 +258,8 @@
" <td>0.484271</td>\n",
" <td>8.660648</td>\n",
" <td>-0.479016</td>\n",
- " <td>-28.989979</td>\n",
- " <td>27.533707</td>\n",
+ " <td>-28.989983</td>\n",
+ " <td>27.533710</td>\n",
" <td>0.952658</td>\n",
" <td>10.477735</td>\n",
" <td>-0.185771</td>\n",
@@ -283,7 +283,7 @@
" <td>8.185075</td>\n",
" <td>0.208425</td>\n",
" <td>-38.095375</td>\n",
- " <td>31.397882</td>\n",
+ " <td>31.397880</td>\n",
" <td>-1.494916</td>\n",
" <td>10.917299</td>\n",
" <td>0.020985</td>\n",
@@ -306,8 +306,8 @@
" <td>-3.781627</td>\n",
" <td>9.191043</td>\n",
" <td>0.260886</td>\n",
- " <td>-22.667439</td>\n",
- " <td>50.992905</td>\n",
+ " <td>-22.667440</td>\n",
+ " <td>50.992897</td>\n",
" <td>1.600777</td>\n",
" <td>10.125545</td>\n",
" <td>0.595763</td>\n",
@@ -323,14 +323,14 @@
" <td>-0.366586</td>\n",
" <td>0.000000</td>\n",
" <td>194.26416</td>\n",
- " <td>148.226648</td>\n",
+ " <td>148.226647</td>\n",
" <td>...</td>\n",
- " <td>-44.843815</td>\n",
+ " <td>-44.843810</td>\n",
" <td>28.490644</td>\n",
" <td>-6.242015</td>\n",
" <td>10.546545</td>\n",
" <td>0.341848</td>\n",
- " <td>-25.040886</td>\n",
+ " <td>-25.040888</td>\n",
" <td>46.878204</td>\n",
" <td>1.844494</td>\n",
" <td>11.160392</td>\n",
@@ -381,7 +381,7 @@
" <td>-24.712723</td>\n",
" <td>23.410387</td>\n",
" <td>-4.502398</td>\n",
- " <td>6.687983</td>\n",
+ " <td>6.687984</td>\n",
" <td>0.238807</td>\n",
" </tr>\n",
" <tr>\n",
@@ -389,21 +389,21 @@
" <td>rock_96.mp3</td>\n",
" <td>rock</td>\n",
" <td>-541.23600</td>\n",
- " <td>27.163332</td>\n",
+ " <td>27.163334</td>\n",
" <td>-119.113996</td>\n",
" <td>58.420684</td>\n",
" <td>-0.957699</td>\n",
- " <td>-7.415959</td>\n",
+ " <td>-7.415961</td>\n",
" <td>210.49246</td>\n",
" <td>125.453699</td>\n",
" <td>...</td>\n",
" <td>-37.584858</td>\n",
- " <td>28.087940</td>\n",
+ " <td>28.087936</td>\n",
" <td>-9.704238</td>\n",
" <td>8.447620</td>\n",
" <td>0.112760</td>\n",
" <td>-38.147890</td>\n",
- " <td>21.814400</td>\n",
+ " <td>21.814402</td>\n",
" <td>-8.249507</td>\n",
" <td>7.807756</td>\n",
" <td>0.071968</td>\n",
@@ -427,7 +427,7 @@
" <td>7.727378</td>\n",
" <td>0.207489</td>\n",
" <td>-29.497524</td>\n",
- " <td>25.410656</td>\n",
+ " <td>25.410654</td>\n",
" <td>-3.356614</td>\n",
" <td>8.170526</td>\n",
" <td>0.160330</td>\n",
@@ -442,16 +442,16 @@
" <td>52.444200</td>\n",
" <td>-1.705641</td>\n",
" <td>0.000000</td>\n",
- " <td>187.04272</td>\n",
+ " <td>187.04274</td>\n",
" <td>96.440874</td>\n",
" <td>...</td>\n",
- " <td>-26.967852</td>\n",
- " <td>8.714736</td>\n",
+ " <td>-26.967848</td>\n",
+ " <td>8.714737</td>\n",
" <td>-9.511491</td>\n",
" <td>5.551820</td>\n",
" <td>-0.025604</td>\n",
- " <td>-23.020082</td>\n",
- " <td>13.948639</td>\n",
+ " <td>-23.020084</td>\n",
+ " <td>13.948638</td>\n",
" <td>-2.664985</td>\n",
" <td>5.051498</td>\n",
" <td>-0.258407</td>\n",
@@ -465,17 +465,17 @@
" <td>-49.380943</td>\n",
" <td>54.045627</td>\n",
" <td>-0.863093</td>\n",
- " <td>-32.930650</td>\n",
+ " <td>-32.930653</td>\n",
" <td>191.73538</td>\n",
" <td>93.971242</td>\n",
" <td>...</td>\n",
" <td>-21.929403</td>\n",
" <td>17.050608</td>\n",
" <td>-5.296691</td>\n",
- " <td>5.894962</td>\n",
+ " <td>5.894963</td>\n",
" <td>0.390705</td>\n",
" <td>-20.983192</td>\n",
- " <td>29.312021</td>\n",
+ " <td>29.312023</td>\n",
" <td>-0.321836</td>\n",
" <td>6.571660</td>\n",
" <td>0.384794</td>\n",
@@ -494,36 +494,36 @@
"4 classical_12.mp3 classical -562.67523 -148.133560 -270.975406 \n",
".. ... ... ... ... ... \n",
"395 rock_95.mp3 rock -553.11010 -5.218835 -193.506047 \n",
- "396 rock_96.mp3 rock -541.23600 27.163332 -119.113996 \n",
+ "396 rock_96.mp3 rock -541.23600 27.163334 -119.113996 \n",
"397 rock_97.mp3 rock -518.49500 58.526745 -66.267744 \n",
"398 rock_98.mp3 rock -518.64307 53.555115 -45.734517 \n",
"399 rock_99.mp3 rock -544.70310 75.612130 -49.380943 \n",
"\n",
" 0_std 0_skew 1_min 1_max 1_mean ... 38_min \\\n",
"0 51.142183 -0.468374 0.000000 178.75162 111.332342 ... -44.098070 \n",
- "1 53.561839 -0.772320 0.029056 259.63272 215.094182 ... -27.458416 \n",
+ "1 53.561838 -0.772320 0.029056 259.63270 215.094182 ... -27.458416 \n",
"2 83.381622 -2.587179 0.000000 190.47589 112.471713 ... -27.335688 \n",
"3 76.246992 -2.402418 0.000000 159.42575 99.853645 ... -31.774948 \n",
- "4 52.191182 -0.366586 0.000000 194.26416 148.226648 ... -44.843815 \n",
+ "4 52.191182 -0.366586 0.000000 194.26416 148.226647 ... -44.843810 \n",
".. ... ... ... ... ... ... ... \n",
"395 76.869437 -0.201055 -89.948746 201.18045 111.724191 ... -27.043941 \n",
- "396 58.420684 -0.957699 -7.415959 210.49246 125.453699 ... -37.584858 \n",
+ "396 58.420684 -0.957699 -7.415961 210.49246 125.453699 ... -37.584858 \n",
"397 65.635619 -0.898026 -58.824410 175.20135 99.288265 ... -29.620445 \n",
- "398 52.444200 -1.705641 0.000000 187.04272 96.440874 ... -26.967852 \n",
- "399 54.045627 -0.863093 -32.930650 191.73538 93.971242 ... -21.929403 \n",
+ "398 52.444200 -1.705641 0.000000 187.04274 96.440874 ... -26.967848 \n",
+ "399 54.045627 -0.863093 -32.930653 191.73538 93.971242 ... -21.929403 \n",
"\n",
" 38_max 38_mean 38_std 38_skew 39_min 39_max 39_mean \\\n",
"0 47.308060 -3.713503 16.553984 0.230691 -46.794480 49.352516 -2.282116 \n",
- "1 29.811110 0.484271 8.660648 -0.479016 -28.989979 27.533707 0.952658 \n",
- "2 27.610388 -0.333233 8.185075 0.208425 -38.095375 31.397882 -1.494916 \n",
- "3 31.500881 -3.781627 9.191043 0.260886 -22.667439 50.992905 1.600777 \n",
- "4 28.490644 -6.242015 10.546545 0.341848 -25.040886 46.878204 1.844494 \n",
+ "1 29.811110 0.484271 8.660648 -0.479016 -28.989983 27.533710 0.952658 \n",
+ "2 27.610388 -0.333233 8.185075 0.208425 -38.095375 31.397880 -1.494916 \n",
+ "3 31.500881 -3.781627 9.191043 0.260886 -22.667440 50.992897 1.600777 \n",
+ "4 28.490644 -6.242015 10.546545 0.341848 -25.040888 46.878204 1.844494 \n",
".. ... ... ... ... ... ... ... \n",
"395 22.451445 -7.234634 8.471853 0.753855 -24.712723 23.410387 -4.502398 \n",
- "396 28.087940 -9.704238 8.447620 0.112760 -38.147890 21.814400 -8.249507 \n",
- "397 26.325895 -5.722825 7.727378 0.207489 -29.497524 25.410656 -3.356614 \n",
- "398 8.714736 -9.511491 5.551820 -0.025604 -23.020082 13.948639 -2.664985 \n",
- "399 17.050608 -5.296691 5.894962 0.390705 -20.983192 29.312021 -0.321836 \n",
+ "396 28.087936 -9.704238 8.447620 0.112760 -38.147890 21.814402 -8.249507 \n",
+ "397 26.325895 -5.722825 7.727378 0.207489 -29.497524 25.410654 -3.356614 \n",
+ "398 8.714737 -9.511491 5.551820 -0.025604 -23.020084 13.948638 -2.664985 \n",
+ "399 17.050608 -5.296691 5.894963 0.390705 -20.983192 29.312023 -0.321836 \n",
"\n",
" 39_std 39_skew \n",
"0 15.285639 0.171462 \n",
@@ -532,7 +532,7 @@
"3 10.125545 0.595763 \n",
"4 11.160392 0.503120 \n",
".. ... ... \n",
- "395 6.687983 0.238807 \n",
+ "395 6.687984 0.238807 \n",
"396 7.807756 0.071968 \n",
"397 8.170526 0.160330 \n",
"398 5.051498 -0.258407 \n",
@@ -571,16 +571,16 @@
"id": "4ac5c765",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:18.127758Z",
- "iopub.status.busy": "2023-09-01T11:35:18.127051Z",
- "iopub.status.idle": "2023-09-01T11:35:18.220446Z",
- "shell.execute_reply": "2023-09-01T11:35:18.219871Z"
+ "iopub.execute_input": "2023-10-08T16:34:33.841753Z",
+ "iopub.status.busy": "2023-10-08T16:34:33.841067Z",
+ "iopub.status.idle": "2023-10-08T16:34:33.946723Z",
+ "shell.execute_reply": "2023-10-08T16:34:33.945660Z"
},
"papermill": {
- "duration": 0.100061,
- "end_time": "2023-09-01T11:35:18.222876",
+ "duration": 0.117637,
+ "end_time": "2023-10-08T16:34:33.949252",
"exception": false,
- "start_time": "2023-09-01T11:35:18.122815",
+ "start_time": "2023-10-08T16:34:33.831615",
"status": "completed"
},
"tags": []
@@ -617,24 +617,24 @@
},
"papermill": {
"default_parameters": {},
- "duration": 10.352537,
- "end_time": "2023-09-01T11:35:18.542818",
+ "duration": 18.022001,
+ "end_time": "2023-10-08T16:34:34.276071",
"environment_variables": {},
"exception": null,
- "input_path": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/notebooks/3_aggregate_features.ipynb",
- "output_path": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/notebooks/3_aggregate_features.ipynb",
+ "input_path": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/notebooks/3_aggregate_features.ipynb",
+ "output_path": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/notebooks/3_aggregate_features.ipynb",
"parameters": {
"INPUT_PATHS": {
- "raw_features": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/3_aggregate_features/input/raw_features.csv"
+ "raw_features": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/3_aggregate_features/input/raw_features.csv"
},
"OUTPUT_PATHS": {
- "aggregated_features": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/3_aggregate_features/output/features.csv"
+ "aggregated_features": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/3_aggregate_features/output/features.csv"
}
},
- "start_time": "2023-09-01T11:35:08.190281",
+ "start_time": "2023-10-08T16:34:16.254070",
"version": "2.4.0"
}
},
"nbformat": 4,
"nbformat_minor": 5
-}
+}
\ No newline at end of file
diff --git a/notebooks/4_split.ipynb b/notebooks/4_split.ipynb
index e4d2c5b8d040a4d02b422248156afd19de044258..65be4720be3d6404460e2bfc5984cc70a96493af 100644
--- a/notebooks/4_split.ipynb
+++ b/notebooks/4_split.ipynb
@@ -5,10 +5,10 @@
"id": "e92b4fe9",
"metadata": {
"papermill": {
- "duration": 0.004009,
- "end_time": "2023-09-01T11:35:21.835314",
+ "duration": 0.063224,
+ "end_time": "2023-10-10T06:44:50.776214",
"exception": false,
- "start_time": "2023-09-01T11:35:21.831305",
+ "start_time": "2023-10-10T06:44:50.712990",
"status": "completed"
},
"tags": []
@@ -19,20 +19,20 @@
},
{
"cell_type": "code",
- "execution_count": 2,
+ "execution_count": 1,
"id": "5f1fae44",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:21.844307Z",
- "iopub.status.busy": "2023-09-01T11:35:21.844022Z",
- "iopub.status.idle": "2023-09-01T11:35:22.144905Z",
- "shell.execute_reply": "2023-09-01T11:35:22.144381Z"
+ "iopub.execute_input": "2023-10-10T06:44:50.886489Z",
+ "iopub.status.busy": "2023-10-10T06:44:50.885646Z",
+ "iopub.status.idle": "2023-10-10T06:44:51.243403Z",
+ "shell.execute_reply": "2023-10-10T06:44:51.242308Z"
},
"papermill": {
- "duration": 0.308442,
- "end_time": "2023-09-01T11:35:22.147872",
+ "duration": 0.429588,
+ "end_time": "2023-10-10T06:44:51.263594",
"exception": false,
- "start_time": "2023-09-01T11:35:21.839430",
+ "start_time": "2023-10-10T06:44:50.834006",
"status": "completed"
},
"tags": []
@@ -46,24 +46,21 @@
},
{
"cell_type": "code",
- "execution_count": 3,
+ "execution_count": 2,
"id": "01de1b27",
"metadata": {
"collapsed": false,
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:22.156002Z",
- "iopub.status.busy": "2023-09-01T11:35:22.155641Z",
- "iopub.status.idle": "2023-09-01T11:35:22.160059Z",
- "shell.execute_reply": "2023-09-01T11:35:22.159355Z"
- },
- "jupyter": {
- "outputs_hidden": false
+ "iopub.execute_input": "2023-10-10T06:44:51.398032Z",
+ "iopub.status.busy": "2023-10-10T06:44:51.397490Z",
+ "iopub.status.idle": "2023-10-10T06:44:51.409221Z",
+ "shell.execute_reply": "2023-10-10T06:44:51.407303Z"
},
"papermill": {
- "duration": 0.010206,
- "end_time": "2023-09-01T11:35:22.161506",
+ "duration": 0.102629,
+ "end_time": "2023-10-10T06:44:51.433068",
"exception": false,
- "start_time": "2023-09-01T11:35:22.151300",
+ "start_time": "2023-10-10T06:44:51.330439",
"status": "completed"
},
"tags": [
@@ -85,20 +82,20 @@
},
{
"cell_type": "code",
- "execution_count": 1,
- "id": "205bb941",
+ "execution_count": 3,
+ "id": "c22f1f87",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:21.808793Z",
- "iopub.status.busy": "2023-09-01T11:35:21.808502Z",
- "iopub.status.idle": "2023-09-01T11:35:21.824152Z",
- "shell.execute_reply": "2023-09-01T11:35:21.822789Z"
+ "iopub.execute_input": "2023-10-10T06:44:51.547244Z",
+ "iopub.status.busy": "2023-10-10T06:44:51.546629Z",
+ "iopub.status.idle": "2023-10-10T06:44:51.552581Z",
+ "shell.execute_reply": "2023-10-10T06:44:51.551320Z"
},
"papermill": {
- "duration": 0.023269,
- "end_time": "2023-09-01T11:35:21.827306",
+ "duration": 0.083628,
+ "end_time": "2023-10-10T06:44:51.576083",
"exception": false,
- "start_time": "2023-09-01T11:35:21.804037",
+ "start_time": "2023-10-10T06:44:51.492455",
"status": "completed"
},
"tags": [
@@ -109,29 +106,29 @@
"source": [
"# Parameters\n",
"INPUT_PATHS = {\n",
- " \"aggregated_features\": \"/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/4_split/input/features.csv\"\n",
+ " \"aggregated_features\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/input/features.csv\"\n",
"}\n",
"OUTPUT_PATHS = {\n",
- " \"split\": \"/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/4_split/output/split.csv\"\n",
+ " \"split\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/output/split.csv\"\n",
"}\n"
]
},
{
"cell_type": "code",
- "execution_count": 6,
+ "execution_count": 4,
"id": "a4cc6800",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:22.190493Z",
- "iopub.status.busy": "2023-09-01T11:35:22.190038Z",
- "iopub.status.idle": "2023-09-01T11:35:22.217115Z",
- "shell.execute_reply": "2023-09-01T11:35:22.216124Z"
+ "iopub.execute_input": "2023-10-10T06:44:51.698080Z",
+ "iopub.status.busy": "2023-10-10T06:44:51.697602Z",
+ "iopub.status.idle": "2023-10-10T06:44:51.739606Z",
+ "shell.execute_reply": "2023-10-10T06:44:51.738608Z"
},
"papermill": {
- "duration": 0.03203,
- "end_time": "2023-09-01T11:35:22.218934",
+ "duration": 0.123641,
+ "end_time": "2023-10-10T06:44:51.751878",
"exception": false,
- "start_time": "2023-09-01T11:35:22.186904",
+ "start_time": "2023-10-10T06:44:51.628237",
"status": "completed"
},
"tags": []
@@ -143,25 +140,25 @@
"for path in INPUT_PATHS.values():\n",
" assert Path(path).exists()\n",
"\n",
- "features = pd.read_csv(INPUT_PATHS[\"features\"])"
+ "features = pd.read_csv(INPUT_PATHS[\"aggregated_features\"])"
]
},
{
"cell_type": "code",
- "execution_count": 7,
+ "execution_count": 5,
"id": "a186d0c4",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:22.225158Z",
- "iopub.status.busy": "2023-09-01T11:35:22.224866Z",
- "iopub.status.idle": "2023-09-01T11:35:22.233993Z",
- "shell.execute_reply": "2023-09-01T11:35:22.232970Z"
+ "iopub.execute_input": "2023-10-10T06:44:51.859142Z",
+ "iopub.status.busy": "2023-10-10T06:44:51.858230Z",
+ "iopub.status.idle": "2023-10-10T06:44:51.872631Z",
+ "shell.execute_reply": "2023-10-10T06:44:51.871083Z"
},
"papermill": {
- "duration": 0.014722,
- "end_time": "2023-09-01T11:35:22.236276",
+ "duration": 0.089311,
+ "end_time": "2023-10-10T06:44:51.889097",
"exception": false,
- "start_time": "2023-09-01T11:35:22.221554",
+ "start_time": "2023-10-10T06:44:51.799786",
"status": "completed"
},
"tags": []
@@ -187,20 +184,20 @@
},
{
"cell_type": "code",
- "execution_count": 8,
+ "execution_count": 6,
"id": "091e0641",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:22.248578Z",
- "iopub.status.busy": "2023-09-01T11:35:22.248298Z",
- "iopub.status.idle": "2023-09-01T11:35:22.260910Z",
- "shell.execute_reply": "2023-09-01T11:35:22.260154Z"
+ "iopub.execute_input": "2023-10-10T06:44:52.001080Z",
+ "iopub.status.busy": "2023-10-10T06:44:52.000172Z",
+ "iopub.status.idle": "2023-10-10T06:44:52.020332Z",
+ "shell.execute_reply": "2023-10-10T06:44:52.019247Z"
},
"papermill": {
- "duration": 0.022698,
- "end_time": "2023-09-01T11:35:22.264468",
+ "duration": 0.098232,
+ "end_time": "2023-10-10T06:44:52.038434",
"exception": false,
- "start_time": "2023-09-01T11:35:22.241770",
+ "start_time": "2023-10-10T06:44:51.940202",
"status": "completed"
},
"tags": []
@@ -270,12 +267,12 @@
" <tr>\n",
" <th>396</th>\n",
" <td>rock_96.mp3</td>\n",
- " <td>False</td>\n",
+ " <td>True</td>\n",
" </tr>\n",
" <tr>\n",
" <th>397</th>\n",
" <td>rock_97.mp3</td>\n",
- " <td>True</td>\n",
+ " <td>False</td>\n",
" </tr>\n",
" <tr>\n",
" <th>398</th>\n",
@@ -285,7 +282,7 @@
" <tr>\n",
" <th>399</th>\n",
" <td>rock_99.mp3</td>\n",
- " <td>True</td>\n",
+ " <td>False</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
@@ -301,15 +298,15 @@
"4 classical_12.mp3 True\n",
".. ... ...\n",
"395 rock_95.mp3 True\n",
- "396 rock_96.mp3 False\n",
- "397 rock_97.mp3 True\n",
+ "396 rock_96.mp3 True\n",
+ "397 rock_97.mp3 False\n",
"398 rock_98.mp3 True\n",
- "399 rock_99.mp3 True\n",
+ "399 rock_99.mp3 False\n",
"\n",
"[400 rows x 2 columns]"
]
},
- "execution_count": 8,
+ "execution_count": 6,
"metadata": {},
"output_type": "execute_result"
}
@@ -320,20 +317,20 @@
},
{
"cell_type": "code",
- "execution_count": 9,
+ "execution_count": 7,
"id": "7b11b8bb",
"metadata": {
"execution": {
- "iopub.execute_input": "2023-09-01T11:35:22.274622Z",
- "iopub.status.busy": "2023-09-01T11:35:22.274234Z",
- "iopub.status.idle": "2023-09-01T11:35:22.281519Z",
- "shell.execute_reply": "2023-09-01T11:35:22.280717Z"
+ "iopub.execute_input": "2023-10-10T06:44:52.154737Z",
+ "iopub.status.busy": "2023-10-10T06:44:52.154026Z",
+ "iopub.status.idle": "2023-10-10T06:44:52.164455Z",
+ "shell.execute_reply": "2023-10-10T06:44:52.163224Z"
},
"papermill": {
- "duration": 0.01433,
- "end_time": "2023-09-01T11:35:22.283192",
+ "duration": 0.075575,
+ "end_time": "2023-10-10T06:44:52.179183",
"exception": false,
- "start_time": "2023-09-01T11:35:22.268862",
+ "start_time": "2023-10-10T06:44:52.103608",
"status": "completed"
},
"tags": []
@@ -370,24 +367,24 @@
},
"papermill": {
"default_parameters": {},
- "duration": 1.989508,
- "end_time": "2023-09-01T11:35:22.603293",
+ "duration": 3.419231,
+ "end_time": "2023-10-10T06:44:52.564357",
"environment_variables": {},
"exception": null,
- "input_path": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/notebooks/4_split.ipynb",
- "output_path": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/notebooks/4_split.ipynb",
+ "input_path": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/notebooks/4_split.ipynb",
+ "output_path": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/notebooks/4_split.ipynb",
"parameters": {
"INPUT_PATHS": {
- "aggregated_features": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/4_split/input/features.csv"
+ "aggregated_features": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/input/features.csv"
},
"OUTPUT_PATHS": {
- "split": "/home/lukas/Programming/uni/bachelorarbeit/dbrepo-ismir/tmp/4_split/output/split.csv"
+ "split": "/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/output/split.csv"
}
},
- "start_time": "2023-09-01T11:35:20.613785",
+ "start_time": "2023-10-10T06:44:49.145126",
"version": "2.4.0"
}
},
"nbformat": 4,
"nbformat_minor": 5
-}
+}
\ No newline at end of file
diff --git a/notebooks/main.ipynb b/notebooks/main.ipynb
index 4423d8fd3fa3102931720057d4efc77f74652ae0..a33fb8264fac0ef9da7dd9d1bb0065218e25a21d 100644
--- a/notebooks/main.ipynb
+++ b/notebooks/main.ipynb
@@ -14,15 +14,24 @@
},
{
"cell_type": "code",
- "execution_count": 1,
+ "execution_count": 19,
"metadata": {
"collapsed": true,
"ExecuteTime": {
- "end_time": "2023-09-01T11:23:33.535665313Z",
- "start_time": "2023-09-01T11:23:33.530568931Z"
+ "end_time": "2023-10-10T06:39:16.744169438Z",
+ "start_time": "2023-10-10T06:39:15.778267163Z"
}
},
- "outputs": [],
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "The autoreload extension is already loaded. To reload it, use:\n",
+ " %reload_ext autoreload\n"
+ ]
+ }
+ ],
"source": [
"%load_ext autoreload\n",
"%autoreload 2"
@@ -30,18 +39,20 @@
},
{
"cell_type": "code",
- "execution_count": 2,
+ "execution_count": 1,
"metadata": {
"collapsed": false,
"ExecuteTime": {
- "end_time": "2023-09-01T11:23:34.729822Z",
- "start_time": "2023-09-01T11:23:33.531052936Z"
+ "end_time": "2023-10-10T06:44:40.271224151Z",
+ "start_time": "2023-10-10T06:44:37.215835196Z"
}
},
"outputs": [],
"source": [
"import yaml\n",
"\n",
+ "import logging\n",
+ "\n",
"from definitions import CONFIG_PATH, BASE_PATH, RESOURCE_PATH\n",
"from fairnb.entity.dbrepo_entity import DbRepoEntity\n",
"from fairnb.entity.invenio_entity import InvenioEntity\n",
@@ -52,17 +63,32 @@
},
{
"cell_type": "code",
- "execution_count": 3,
+ "execution_count": 2,
"metadata": {
"collapsed": false,
"lines_to_next_cell": 2,
"ExecuteTime": {
- "end_time": "2023-09-01T11:23:34.865162022Z",
- "start_time": "2023-09-01T11:23:34.735219145Z"
+ "end_time": "2023-10-10T06:44:40.633271315Z",
+ "start_time": "2023-10-10T06:44:40.276976283Z"
}
},
- "outputs": [],
+ "outputs": [
+ {
+ "name": "stderr",
+ "output_type": "stream",
+ "text": [
+ "DEBUG:urllib3.util.retry:Converted retries value: 1 -> Retry(total=1, connect=None, read=None, redirect=None, status=None)\n",
+ "DEBUG:urllib3.util.retry:Converted retries value: 1 -> Retry(total=1, connect=None, read=None, redirect=None, status=None)\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"POST /api/auth/realms/dbrepo/protocol/openid-connect/token HTTP/1.1\" 200 4289\n"
+ ]
+ }
+ ],
"source": [
+ "logging.basicConfig(\n",
+ " level=logging.DEBUG\n",
+ ")\n",
+ "\n",
"# experiment executor setup\n",
"executor = Executor()\n",
"util = Util.get_instance() # util caches loaded credentials -> via Singleton\n",
@@ -80,8 +106,8 @@
"metadata": {
"collapsed": false,
"ExecuteTime": {
- "end_time": "2023-09-01T11:23:34.884649912Z",
- "start_time": "2023-09-01T11:23:34.868201423Z"
+ "end_time": "2023-10-08T18:41:21.244795111Z",
+ "start_time": "2023-10-08T18:41:21.212056124Z"
}
},
"outputs": [],
@@ -195,12 +221,12 @@
},
{
"cell_type": "code",
- "execution_count": 7,
+ "execution_count": 24,
"metadata": {
"collapsed": false,
"ExecuteTime": {
- "end_time": "2023-09-01T11:35:20.553848667Z",
- "start_time": "2023-09-01T11:35:07.385204844Z"
+ "end_time": "2023-10-08T16:34:34.861181245Z",
+ "start_time": "2023-10-08T16:34:12.246060215Z"
}
},
"outputs": [
@@ -210,11 +236,29 @@
"application/vnd.jupyter.widget-view+json": {
"version_major": 2,
"version_minor": 0,
- "model_id": "33d92d07cc024b7d85cdcd4a27e7e5d4"
+ "model_id": "f24cd53114664594bbc0ff11b086ca0f"
}
},
"metadata": {},
"output_type": "display_data"
+ },
+ {
+ "ename": "Exception",
+ "evalue": "Table creation failed for table aggregated_features",
+ "output_type": "error",
+ "traceback": [
+ "\u001B[0;31m---------------------------------------------------------------------------\u001B[0m",
+ "\u001B[0;31mException\u001B[0m Traceback (most recent call last)",
+ "Cell \u001B[0;32mIn[24], line 31\u001B[0m\n\u001B[1;32m 3\u001B[0m raw_features_entity \u001B[38;5;241m=\u001B[39m DbRepoEntity\u001B[38;5;241m.\u001B[39mnew(\n\u001B[1;32m 4\u001B[0m location\u001B[38;5;241m=\u001B[39mLOCAL_PATH \u001B[38;5;241m/\u001B[39m \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124m2_generate_features\u001B[39m\u001B[38;5;124m\"\u001B[39m \u001B[38;5;241m/\u001B[39m \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124moutput\u001B[39m\u001B[38;5;124m\"\u001B[39m \u001B[38;5;241m/\u001B[39m \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mraw_features.csv\u001B[39m\u001B[38;5;124m\"\u001B[39m,\n\u001B[1;32m 5\u001B[0m dbrepo_connector\u001B[38;5;241m=\u001B[39mconnector,\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 10\u001B[0m \u001B[38;5;28mtype\u001B[39m\u001B[38;5;241m=\u001B[39m\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mraw_features\u001B[39m\u001B[38;5;124m\"\u001B[39m\n\u001B[1;32m 11\u001B[0m )\n\u001B[1;32m 13\u001B[0m nb_config_aggregate_features \u001B[38;5;241m=\u001B[39m NbConfig(\n\u001B[1;32m 14\u001B[0m nb_location\u001B[38;5;241m=\u001B[39mNOTEBOOK_PATH \u001B[38;5;241m/\u001B[39m \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124m3_aggregate_features.ipynb\u001B[39m\u001B[38;5;124m\"\u001B[39m,\n\u001B[1;32m 15\u001B[0m entities\u001B[38;5;241m=\u001B[39m[\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 28\u001B[0m ]\n\u001B[1;32m 29\u001B[0m )\n\u001B[0;32m---> 31\u001B[0m \u001B[43mexecutor\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mexecute\u001B[49m\u001B[43m(\u001B[49m\u001B[43mnb_config_aggregate_features\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43monly_local\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[38;5;28;43;01mFalse\u001B[39;49;00m\u001B[43m)\u001B[49m\n",
+ "File \u001B[0;32m~/Programming/uni/bachelorarbeit/fairnb/fairnb/executor.py:31\u001B[0m, in \u001B[0;36mExecutor.execute\u001B[0;34m(cls, nb_config, require_download, only_local, **kwargs)\u001B[0m\n\u001B[1;32m 28\u001B[0m \u001B[38;5;28mcls\u001B[39m\u001B[38;5;241m.\u001B[39mexecute_notebook(nb_config)\n\u001B[1;32m 30\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m \u001B[38;5;129;01mnot\u001B[39;00m only_local:\n\u001B[0;32m---> 31\u001B[0m \u001B[38;5;28;43mcls\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mupload_entities\u001B[49m\u001B[43m(\u001B[49m\u001B[43mnb_config\u001B[49m\u001B[43m)\u001B[49m\n",
+ "File \u001B[0;32m~/Programming/uni/bachelorarbeit/fairnb/fairnb/executor.py:52\u001B[0m, in \u001B[0;36mExecutor.upload_entities\u001B[0;34m(nb_config)\u001B[0m\n\u001B[1;32m 47\u001B[0m \u001B[38;5;129m@staticmethod\u001B[39m\n\u001B[1;32m 48\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m \u001B[38;5;21mupload_entities\u001B[39m(nb_config: NbConfig):\n\u001B[1;32m 49\u001B[0m \u001B[38;5;66;03m# load generated entity and upload it\u001B[39;00m\n\u001B[1;32m 50\u001B[0m \u001B[38;5;28;01mfor\u001B[39;00m entity \u001B[38;5;129;01min\u001B[39;00m nb_config\u001B[38;5;241m.\u001B[39mentities:\n\u001B[1;32m 51\u001B[0m \u001B[38;5;66;03m# use inspect to get path of caller\u001B[39;00m\n\u001B[0;32m---> 52\u001B[0m \u001B[43mentity\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mupload\u001B[49m\u001B[43m(\u001B[49m\u001B[43mnb_config\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mnb_location\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mnb_config\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mdependencies\u001B[49m\u001B[43m)\u001B[49m\n",
+ "File \u001B[0;32m~/Programming/uni/bachelorarbeit/fairnb/fairnb/entity/dbrepo_entity.py:65\u001B[0m, in \u001B[0;36mDbRepoEntity.upload\u001B[0;34m(self, executed_file, dependencies)\u001B[0m\n\u001B[1;32m 60\u001B[0m df[\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mentity_id\u001B[39m\u001B[38;5;124m\"\u001B[39m] \u001B[38;5;241m=\u001B[39m \u001B[38;5;241m-\u001B[39m\u001B[38;5;241m1\u001B[39m \u001B[38;5;66;03m# temporary, needed for easy table schema retrieval\u001B[39;00m\n\u001B[1;32m 62\u001B[0m \u001B[38;5;66;03m# create table if not exists\u001B[39;00m\n\u001B[1;32m 63\u001B[0m \u001B[38;5;66;03m# update uri etc\u001B[39;00m\n\u001B[1;32m 64\u001B[0m \u001B[38;5;66;03m# create table if it not already exists\u001B[39;00m\n\u001B[0;32m---> 65\u001B[0m table \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mdbrepo_connector\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mcreate_table_if_not_exists\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 66\u001B[0m \u001B[43m \u001B[49m\u001B[43mdf\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mtable_name\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mtable_description\u001B[49m\n\u001B[1;32m 67\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 68\u001B[0m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mtable_id \u001B[38;5;241m=\u001B[39m \u001B[38;5;28mint\u001B[39m(table[\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mid\u001B[39m\u001B[38;5;124m\"\u001B[39m])\n\u001B[1;32m 70\u001B[0m metadata \u001B[38;5;241m=\u001B[39m EntityProvenance\u001B[38;5;241m.\u001B[39mnew(\n\u001B[1;32m 71\u001B[0m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mname,\n\u001B[1;32m 72\u001B[0m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mdescription,\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 77\u001B[0m platform\u001B[38;5;241m=\u001B[39m\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mdbrepo\u001B[39m\u001B[38;5;124m\"\u001B[39m,\n\u001B[1;32m 78\u001B[0m )\n",
+ "File \u001B[0;32m~/Programming/uni/bachelorarbeit/fairnb/fairnb/api/dbrepo.py:35\u001B[0m, in \u001B[0;36mre_auth.<locals>.inner\u001B[0;34m(self, *args, **kwargs)\u001B[0m\n\u001B[1;32m 33\u001B[0m LOG\u001B[38;5;241m.\u001B[39mwarning(\u001B[38;5;124mf\u001B[39m\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mRe-login due to expired token\u001B[39m\u001B[38;5;124m\"\u001B[39m)\n\u001B[1;32m 34\u001B[0m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mauthenticate_keycloak()\n\u001B[0;32m---> 35\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[43mfunc\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;28;43mself\u001B[39;49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\n",
+ "File \u001B[0;32m~/Programming/uni/bachelorarbeit/fairnb/fairnb/api/dbrepo.py:242\u001B[0m, in \u001B[0;36mDBRepoConnector.create_table_if_not_exists\u001B[0;34m(self, dataframe, table_name, table_descriptor)\u001B[0m\n\u001B[1;32m 235\u001B[0m \u001B[38;5;129m@re_auth\u001B[39m\n\u001B[1;32m 236\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m \u001B[38;5;21mcreate_table_if_not_exists\u001B[39m(\u001B[38;5;28mself\u001B[39m,\n\u001B[1;32m 237\u001B[0m dataframe: pd\u001B[38;5;241m.\u001B[39mDataFrame,\n\u001B[1;32m 238\u001B[0m table_name: \u001B[38;5;28mstr\u001B[39m,\n\u001B[1;32m 239\u001B[0m table_descriptor: \u001B[38;5;28mstr\u001B[39m\n\u001B[1;32m 240\u001B[0m ):\n\u001B[1;32m 241\u001B[0m table \u001B[38;5;241m=\u001B[39m table \u001B[38;5;28;01mif\u001B[39;00m (table \u001B[38;5;241m:=\u001B[39m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mget_table(table_name)) \u001B[38;5;129;01mis\u001B[39;00m \u001B[38;5;129;01mnot\u001B[39;00m \u001B[38;5;28;01mNone\u001B[39;00m \u001B[38;5;28;01melse\u001B[39;00m \\\n\u001B[0;32m--> 242\u001B[0m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mcreate_table\u001B[49m\u001B[43m(\u001B[49m\u001B[43mdataframe\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mtable_name\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mtable_descriptor\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 244\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m table\n",
+ "File \u001B[0;32m~/Programming/uni/bachelorarbeit/fairnb/fairnb/api/dbrepo.py:35\u001B[0m, in \u001B[0;36mre_auth.<locals>.inner\u001B[0;34m(self, *args, **kwargs)\u001B[0m\n\u001B[1;32m 33\u001B[0m LOG\u001B[38;5;241m.\u001B[39mwarning(\u001B[38;5;124mf\u001B[39m\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mRe-login due to expired token\u001B[39m\u001B[38;5;124m\"\u001B[39m)\n\u001B[1;32m 34\u001B[0m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mauthenticate_keycloak()\n\u001B[0;32m---> 35\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[43mfunc\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;28;43mself\u001B[39;49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\n",
+ "File \u001B[0;32m~/Programming/uni/bachelorarbeit/fairnb/fairnb/api/dbrepo.py:231\u001B[0m, in \u001B[0;36mDBRepoConnector.create_table\u001B[0;34m(self, dataframe, table_name, table_descriptor)\u001B[0m\n\u001B[1;32m 228\u001B[0m table \u001B[38;5;241m=\u001B[39m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mget_table(table_name)\n\u001B[1;32m 230\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m \u001B[38;5;129;01mnot\u001B[39;00m table:\n\u001B[0;32m--> 231\u001B[0m \u001B[38;5;28;01mraise\u001B[39;00m \u001B[38;5;167;01mException\u001B[39;00m(\u001B[38;5;124mf\u001B[39m\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mTable creation failed for table \u001B[39m\u001B[38;5;132;01m{\u001B[39;00mtable_name\u001B[38;5;132;01m}\u001B[39;00m\u001B[38;5;124m\"\u001B[39m)\n\u001B[1;32m 233\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m table\n",
+ "\u001B[0;31mException\u001B[0m: Table creation failed for table aggregated_features"
+ ]
}
],
"source": [
@@ -253,26 +297,226 @@
},
{
"cell_type": "code",
- "execution_count": 8,
+ "execution_count": 3,
"metadata": {
"collapsed": false,
"ExecuteTime": {
- "end_time": "2023-09-01T11:35:24.012990794Z",
- "start_time": "2023-09-01T11:35:20.562862853Z"
+ "end_time": "2023-10-10T06:47:15.707557690Z",
+ "start_time": "2023-10-10T06:44:48.435988977Z"
}
},
"outputs": [
+ {
+ "name": "stderr",
+ "output_type": "stream",
+ "text": [
+ "INFO:papermill:Input Notebook: /home/lukas/Programming/uni/bachelorarbeit/fairnb/notebooks/4_split.ipynb\n",
+ "INFO:papermill:Output Notebook: /home/lukas/Programming/uni/bachelorarbeit/fairnb/notebooks/4_split.ipynb\n",
+ "DEBUG:blib2to3.pgen2.driver:NAME 'INPUT_PATHS' (prefix='# Parameters\\n')\n",
+ "DEBUG:blib2to3.pgen2.driver:EQUAL '=' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:LBRACE '{' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"aggregated_features\"' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:COLON ':' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/input/features.csv\"' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:RBRACE '}' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:NEWLINE '\\n' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:NAME 'OUTPUT_PATHS' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:EQUAL '=' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:LBRACE '{' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"split\"' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:COLON ':' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/output/split.csv\"' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:RBRACE '}' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:NEWLINE '\\n' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:ENDMARKER '' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:Stop.\n",
+ "DEBUG:blib2to3.pgen2.driver:NAME 'INPUT_PATHS' (prefix='# Parameters\\n')\n",
+ "DEBUG:blib2to3.pgen2.driver:EQUAL '=' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:LBRACE '{' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"aggregated_features\"' (prefix='\\n ')\n",
+ "DEBUG:blib2to3.pgen2.driver:COLON ':' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/input/features.csv\"' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:RBRACE '}' (prefix='\\n')\n",
+ "DEBUG:blib2to3.pgen2.driver:NEWLINE '\\n' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:NAME 'OUTPUT_PATHS' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:EQUAL '=' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:LBRACE '{' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"split\"' (prefix='\\n ')\n",
+ "DEBUG:blib2to3.pgen2.driver:COLON ':' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:STRING '\"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/output/split.csv\"' (prefix=' ')\n",
+ "DEBUG:blib2to3.pgen2.driver:RBRACE '}' (prefix='\\n')\n",
+ "DEBUG:blib2to3.pgen2.driver:NEWLINE '\\n' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:ENDMARKER '' (prefix='')\n",
+ "DEBUG:blib2to3.pgen2.driver:Stop.\n"
+ ]
+ },
{
"data": {
- "text/plain": "Executing: 0%| | 0/10 [00:00<?, ?cell/s]",
+ "text/plain": "Executing: 0%| | 0/8 [00:00<?, ?cell/s]",
"application/vnd.jupyter.widget-view+json": {
"version_major": 2,
"version_minor": 0,
- "model_id": "5656b2363a5b4d96b583125f5ebbc234"
+ "model_id": "49e65ec8c902437cbc7a6c0d006902f5"
}
},
"metadata": {},
"output_type": "display_data"
+ },
+ {
+ "name": "stderr",
+ "output_type": "stream",
+ "text": [
+ "DEBUG:asyncio:Using selector: EpollSelector\n",
+ "DEBUG:asyncio:Using selector: EpollSelector\n",
+ "INFO:papermill:Executing notebook with kernel: python3\n",
+ "DEBUG:papermill:Skipping non-executing cell 0\n",
+ "DEBUG:papermill:Executing cell:\n",
+ "import pandas as pd\n",
+ "from pathlib import Path\n",
+ "from definitions import BASE_PATH\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'busy'}\n",
+ "DEBUG:papermill:msg_type: execute_input\n",
+ "DEBUG:papermill:content: {'code': 'import pandas as pd\\nfrom pathlib import Path\\nfrom definitions import BASE_PATH', 'execution_count': 1}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'idle'}\n",
+ "DEBUG:papermill:Executing cell:\n",
+ "# Tagged with 'parameters'\n",
+ "from definitions import BASE_PATH\n",
+ "\n",
+ "INPUT_PATHS: dict[str, str] = {\n",
+ " \"features\": (BASE_PATH / \"tmp\" / \"4_split\" / \"input\" / \"features.csv\").__str__()\n",
+ "}\n",
+ "OUTPUT_PATHS: dict[str, str] = {\n",
+ " \"split\": (BASE_PATH / \"tmp\" / \"4_split\" / \"output\" / \"split.csv\").__str__()\n",
+ "}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'busy'}\n",
+ "DEBUG:papermill:msg_type: execute_input\n",
+ "DEBUG:papermill:content: {'code': '# Tagged with \\'parameters\\'\\nfrom definitions import BASE_PATH\\n\\nINPUT_PATHS: dict[str, str] = {\\n \"features\": (BASE_PATH / \"tmp\" / \"4_split\" / \"input\" / \"features.csv\").__str__()\\n}\\nOUTPUT_PATHS: dict[str, str] = {\\n \"split\": (BASE_PATH / \"tmp\" / \"4_split\" / \"output\" / \"split.csv\").__str__()\\n}', 'execution_count': 2}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'idle'}\n",
+ "DEBUG:papermill:Executing cell:\n",
+ "# Parameters\n",
+ "INPUT_PATHS = {\n",
+ " \"aggregated_features\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/input/features.csv\"\n",
+ "}\n",
+ "OUTPUT_PATHS = {\n",
+ " \"split\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/output/split.csv\"\n",
+ "}\n",
+ "\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'busy'}\n",
+ "DEBUG:papermill:msg_type: execute_input\n",
+ "DEBUG:papermill:content: {'code': '# Parameters\\nINPUT_PATHS = {\\n \"aggregated_features\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/input/features.csv\"\\n}\\nOUTPUT_PATHS = {\\n \"split\": \"/home/lukas/Programming/uni/bachelorarbeit/fairnb/tmp/4_split/output/split.csv\"\\n}\\n', 'execution_count': 3}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'idle'}\n",
+ "DEBUG:papermill:Executing cell:\n",
+ "# INPUT\n",
+ "\n",
+ "for path in INPUT_PATHS.values():\n",
+ " assert Path(path).exists()\n",
+ "\n",
+ "features = pd.read_csv(INPUT_PATHS[\"aggregated_features\"])\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'busy'}\n",
+ "DEBUG:papermill:msg_type: execute_input\n",
+ "DEBUG:papermill:content: {'code': '# INPUT\\n\\nfor path in INPUT_PATHS.values():\\n assert Path(path).exists()\\n\\nfeatures = pd.read_csv(INPUT_PATHS[\"aggregated_features\"])', 'execution_count': 4}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'idle'}\n",
+ "DEBUG:papermill:Executing cell:\n",
+ "train = features.sample(frac=0.8).sort_index()\n",
+ "test = features.drop(train.index)\n",
+ "\n",
+ "split_true = pd.DataFrame({\n",
+ " \"filename\": train.filename,\n",
+ " \"train\": True\n",
+ "})\n",
+ "split_false = pd.DataFrame({\n",
+ " \"filename\": test.filename,\n",
+ " \"train\": False\n",
+ "})\n",
+ "\n",
+ "split_concat = pd.concat([split_true, split_false])\\\n",
+ " .sort_values(\"filename\")\\\n",
+ " .reset_index(drop=True)\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'busy'}\n",
+ "DEBUG:papermill:msg_type: execute_input\n",
+ "DEBUG:papermill:content: {'code': 'train = features.sample(frac=0.8).sort_index()\\ntest = features.drop(train.index)\\n\\nsplit_true = pd.DataFrame({\\n \"filename\": train.filename,\\n \"train\": True\\n})\\nsplit_false = pd.DataFrame({\\n \"filename\": test.filename,\\n \"train\": False\\n})\\n\\nsplit_concat = pd.concat([split_true, split_false])\\\\\\n .sort_values(\"filename\")\\\\\\n .reset_index(drop=True)', 'execution_count': 5}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'idle'}\n",
+ "DEBUG:papermill:Executing cell:\n",
+ "split_concat\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'busy'}\n",
+ "DEBUG:papermill:msg_type: execute_input\n",
+ "DEBUG:papermill:content: {'code': 'split_concat', 'execution_count': 6}\n",
+ "DEBUG:papermill:msg_type: execute_result\n",
+ "DEBUG:papermill:content: {'data': {'text/plain': ' filename train\\n0 classical_1.mp3 True\\n1 classical_10.mp3 True\\n2 classical_100.mp3 True\\n3 classical_11.mp3 True\\n4 classical_12.mp3 True\\n.. ... ...\\n395 rock_95.mp3 True\\n396 rock_96.mp3 True\\n397 rock_97.mp3 False\\n398 rock_98.mp3 True\\n399 rock_99.mp3 False\\n\\n[400 rows x 2 columns]', 'text/html': '<div>\\n<style scoped>\\n .dataframe tbody tr th:only-of-type {\\n vertical-align: middle;\\n }\\n\\n .dataframe tbody tr th {\\n vertical-align: top;\\n }\\n\\n .dataframe thead th {\\n text-align: right;\\n }\\n</style>\\n<table border=\"1\" class=\"dataframe\">\\n <thead>\\n <tr style=\"text-align: right;\">\\n <th></th>\\n <th>filename</th>\\n <th>train</th>\\n </tr>\\n </thead>\\n <tbody>\\n <tr>\\n <th>0</th>\\n <td>classical_1.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>1</th>\\n <td>classical_10.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>2</th>\\n <td>classical_100.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>3</th>\\n <td>classical_11.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>4</th>\\n <td>classical_12.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>...</th>\\n <td>...</td>\\n <td>...</td>\\n </tr>\\n <tr>\\n <th>395</th>\\n <td>rock_95.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>396</th>\\n <td>rock_96.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>397</th>\\n <td>rock_97.mp3</td>\\n <td>False</td>\\n </tr>\\n <tr>\\n <th>398</th>\\n <td>rock_98.mp3</td>\\n <td>True</td>\\n </tr>\\n <tr>\\n <th>399</th>\\n <td>rock_99.mp3</td>\\n <td>False</td>\\n </tr>\\n </tbody>\\n</table>\\n<p>400 rows × 2 columns</p>\\n</div>'}, 'metadata': {}, 'execution_count': 6}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'idle'}\n",
+ "DEBUG:papermill:Executing cell:\n",
+ "# output\n",
+ "OUTPUT_PATH = Path(OUTPUT_PATHS[\"split\"])\n",
+ "OUTPUT_PATH.parent.mkdir(parents=True, exist_ok=True)\n",
+ "\n",
+ "output = split_concat\n",
+ "output.to_csv(OUTPUT_PATH, index=False)\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'busy'}\n",
+ "DEBUG:papermill:msg_type: execute_input\n",
+ "DEBUG:papermill:content: {'code': '# output\\nOUTPUT_PATH = Path(OUTPUT_PATHS[\"split\"])\\nOUTPUT_PATH.parent.mkdir(parents=True, exist_ok=True)\\n\\noutput = split_concat\\noutput.to_csv(OUTPUT_PATH, index=False)', 'execution_count': 7}\n",
+ "DEBUG:papermill:msg_type: status\n",
+ "DEBUG:papermill:content: {'execution_state': 'idle'}\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"GET /api/database/3 HTTP/1.1\" 200 None\n",
+ "DEBUG:fairnb.api.dbrepo:<Response [200]>\n",
+ "DEBUG:git.cmd:Popen(['git', 'cat-file', '--batch-check'], cwd=/home/lukas/Programming/uni/bachelorarbeit/fairnb, universal_newlines=False, shell=None, istream=<valid stream>)\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"GET /api/database/3 HTTP/1.1\" 200 None\n",
+ "DEBUG:fairnb.api.dbrepo:<Response [200]>\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"GET /api/database/3 HTTP/1.1\" 200 None\n",
+ "DEBUG:fairnb.api.dbrepo:<Response [200]>\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"POST /api/upload/files/ HTTP/1.1\" 201 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/38d250ca9d0ed66dc8d8439be6051010 HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"POST /api/database/3/table/10/data/import HTTP/1.1\" 202 0\n",
+ "DEBUG:fairnb.api.dbrepo:<Response [202]>\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"GET /api/database/3/table/10/export HTTP/1.1\" 200 None\n",
+ "DEBUG:fairnb.api.dbrepo:<Response [200]>\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"POST /api/upload/files/ HTTP/1.1\" 201 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/00994936fc7b5796e64d7ba92024eb7b HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/00994936fc7b5796e64d7ba92024eb7b HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/00994936fc7b5796e64d7ba92024eb7b HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/00994936fc7b5796e64d7ba92024eb7b HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/00994936fc7b5796e64d7ba92024eb7b HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/00994936fc7b5796e64d7ba92024eb7b HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/00994936fc7b5796e64d7ba92024eb7b HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"POST /api/database/3/table/9/data/import HTTP/1.1\" 202 0\n",
+ "DEBUG:fairnb.api.dbrepo:<Response [202]>\n",
+ "WARNING:fairnb.entity.entity:Dependency has no id, skipping dependency upload\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"POST /api/upload/files/ HTTP/1.1\" 201 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"PATCH /api/upload/files/de7b11fb11fd15feea509d9686152ff8 HTTP/1.1\" 204 0\n",
+ "DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dbrepo2.ec.tuwien.ac.at:443\n",
+ "DEBUG:urllib3.connectionpool:https://dbrepo2.ec.tuwien.ac.at:443 \"POST /api/database/3/table/11/data/import HTTP/1.1\" 202 0\n",
+ "DEBUG:fairnb.api.dbrepo:<Response [202]>\n"
+ ]
}
],
"source": [
diff --git a/notebooks/standalone.ipynb b/notebooks/standalone.ipynb
index 8052009cb2607b44e77034d4eea255218768766f..1d152ffc115a8ed93d5c92d579b3f86ca39d8ed2 100644
--- a/notebooks/standalone.ipynb
+++ b/notebooks/standalone.ipynb
@@ -13,7 +13,7 @@
},
{
"cell_type": "code",
- "execution_count": 1,
+ "execution_count": null,
"outputs": [],
"source": [
"import pickle\n",
@@ -46,10 +46,7 @@
],
"metadata": {
"collapsed": false,
- "ExecuteTime": {
- "end_time": "2023-09-06T16:23:50.320823230Z",
- "start_time": "2023-09-06T16:23:48.109782272Z"
- }
+ "is_executing": true
}
},
{
diff --git a/poetry.lock b/poetry.lock
index ec0ac84a1a9a340a45edc6e02435118355d5bc48..89579b7508b20613f50cd27b8936489c3949a46c 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,9 +1,134 @@
-# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand.
+
+[[package]]
+name = "aiohttp"
+version = "3.8.6"
+description = "Async http client/server framework (asyncio)"
+category = "main"
+optional = false
+python-versions = ">=3.6"
+files = [
+ {file = "aiohttp-3.8.6-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:41d55fc043954cddbbd82503d9cc3f4814a40bcef30b3569bc7b5e34130718c1"},
+ {file = "aiohttp-3.8.6-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:1d84166673694841d8953f0a8d0c90e1087739d24632fe86b1a08819168b4566"},
+ {file = "aiohttp-3.8.6-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:253bf92b744b3170eb4c4ca2fa58f9c4b87aeb1df42f71d4e78815e6e8b73c9e"},
+ {file = "aiohttp-3.8.6-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:3fd194939b1f764d6bb05490987bfe104287bbf51b8d862261ccf66f48fb4096"},
+ {file = "aiohttp-3.8.6-cp310-cp310-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:6c5f938d199a6fdbdc10bbb9447496561c3a9a565b43be564648d81e1102ac22"},
+ {file = "aiohttp-3.8.6-cp310-cp310-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:2817b2f66ca82ee699acd90e05c95e79bbf1dc986abb62b61ec8aaf851e81c93"},
+ {file = "aiohttp-3.8.6-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:0fa375b3d34e71ccccf172cab401cd94a72de7a8cc01847a7b3386204093bb47"},
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+charset-normalizer = ">=2.0,<4.0"
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+yarl = ">=1.0,<2.0"
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+speedups = ["Brotli", "aiodns", "cchardet"]
+
+[[package]]
+name = "aiosignal"
+version = "1.3.1"
+description = "aiosignal: a list of registered asynchronous callbacks"
+category = "main"
+optional = false
+python-versions = ">=3.7"
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[[package]]
name = "annotated-types"
version = "0.5.0"
description = "Reusable constraint types to use with typing.Annotated"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -15,6 +140,7 @@ files = [
name = "ansiwrap"
version = "0.8.4"
description = "textwrap, but savvy to ANSI colors and styles"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -29,6 +155,7 @@ textwrap3 = ">=0.9.2"
name = "anyio"
version = "4.0.0"
description = "High level compatibility layer for multiple asynchronous event loop implementations"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -50,6 +177,7 @@ trio = ["trio (>=0.22)"]
name = "appnope"
version = "0.1.3"
description = "Disable App Nap on macOS >= 10.9"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -61,6 +189,7 @@ files = [
name = "argon2-cffi"
version = "23.1.0"
description = "Argon2 for Python"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -81,6 +210,7 @@ typing = ["mypy"]
name = "argon2-cffi-bindings"
version = "21.2.0"
description = "Low-level CFFI bindings for Argon2"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -118,6 +248,7 @@ tests = ["pytest"]
name = "arrow"
version = "1.2.3"
description = "Better dates & times for Python"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -132,6 +263,7 @@ python-dateutil = ">=2.7.0"
name = "asttokens"
version = "2.2.1"
description = "Annotate AST trees with source code positions"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -149,6 +281,7 @@ test = ["astroid", "pytest"]
name = "async-lru"
version = "2.0.4"
description = "Simple LRU cache for asyncio"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -159,10 +292,23 @@ files = [
[package.dependencies]
typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""}
+[[package]]
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version = "23.1.0"
description = "Classes Without Boilerplate"
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optional = false
python-versions = ">=3.7"
files = [
@@ -181,6 +327,7 @@ tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pyte
name = "audioread"
version = "3.0.0"
description = "multi-library, cross-platform audio decoding"
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optional = false
python-versions = ">=3.6"
files = [
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name = "babel"
version = "2.12.1"
description = "Internationalization utilities"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -202,6 +350,7 @@ files = [
name = "backcall"
version = "0.2.0"
description = "Specifications for callback functions passed in to an API"
+category = "main"
optional = false
python-versions = "*"
files = [
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name = "beautifulsoup4"
version = "4.12.2"
description = "Screen-scraping library"
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optional = false
python-versions = ">=3.6.0"
files = [
@@ -231,6 +381,7 @@ lxml = ["lxml"]
name = "black"
version = "23.7.0"
description = "The uncompromising code formatter."
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "bleach"
version = "6.0.0"
description = "An easy safelist-based HTML-sanitizing tool."
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optional = false
python-versions = ">=3.7"
files = [
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name = "certifi"
version = "2023.7.22"
description = "Python package for providing Mozilla's CA Bundle."
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optional = false
python-versions = ">=3.6"
files = [
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name = "cffi"
version = "1.15.1"
description = "Foreign Function Interface for Python calling C code."
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optional = false
python-versions = "*"
files = [
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name = "charset-normalizer"
version = "3.2.0"
description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
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optional = false
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files = [
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version = "8.1.7"
description = "Composable command line interface toolkit"
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optional = false
python-versions = ">=3.7"
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name = "colorama"
version = "0.4.6"
description = "Cross-platform colored terminal text."
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optional = false
python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"
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version = "0.1.4"
description = "Jupyter Python Comm implementation, for usage in ipykernel, xeus-python etc."
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optional = false
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name = "contourpy"
version = "1.1.0"
description = "Python library for calculating contours of 2D quadrilateral grids"
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optional = false
python-versions = ">=3.8"
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name = "cryptography"
version = "41.0.3"
description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
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optional = false
python-versions = ">=3.7"
files = [
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name = "cycler"
version = "0.11.0"
description = "Composable style cycles"
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optional = false
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version = "1.6.7.post1"
description = "An implementation of the Debug Adapter Protocol for Python"
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optional = false
python-versions = ">=3.7"
files = [
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version = "5.1.1"
description = "Decorators for Humans"
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files = [
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version = "0.7.1"
description = "XML bomb protection for Python stdlib modules"
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optional = false
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version = "2.1.0"
description = "A library to handle automated deprecations"
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name = "ecdsa"
version = "0.18.0"
description = "ECDSA cryptographic signature library (pure python)"
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name = "entrypoints"
version = "0.4"
description = "Discover and load entry points from installed packages."
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version = "1.1.3"
description = "Backport of PEP 654 (exception groups)"
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python-versions = ">=3.7"
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name = "executing"
version = "1.2.0"
description = "Get the currently executing AST node of a frame, and other information"
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python-versions = "*"
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name = "fastjsonschema"
version = "2.18.0"
description = "Fastest Python implementation of JSON schema"
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optional = false
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name = "fonttools"
version = "4.42.1"
description = "Tools to manipulate font files"
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name = "fqdn"
version = "1.5.1"
description = "Validates fully-qualified domain names against RFC 1123, so that they are acceptable to modern bowsers"
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optional = false
python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4"
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[[package]]
name = "future"
version = "0.18.3"
description = "Clean single-source support for Python 3 and 2"
+category = "main"
optional = false
python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
files = [
@@ -835,6 +1079,7 @@ files = [
name = "git-python"
version = "1.0.3"
description = "combination and simplification of some useful git commands"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -849,6 +1094,7 @@ gitpython = "*"
name = "gitdb"
version = "4.0.10"
description = "Git Object Database"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -863,6 +1109,7 @@ smmap = ">=3.0.1,<6"
name = "gitpython"
version = "3.1.33"
description = "GitPython is a Python library used to interact with Git repositories"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -877,6 +1124,7 @@ gitdb = ">=4.0.1,<5"
name = "idna"
version = "3.4"
description = "Internationalized Domain Names in Applications (IDNA)"
+category = "main"
optional = false
python-versions = ">=3.5"
files = [
@@ -888,6 +1136,7 @@ files = [
name = "iniconfig"
version = "2.0.0"
description = "brain-dead simple config-ini parsing"
+category = "dev"
optional = false
python-versions = ">=3.7"
files = [
@@ -899,6 +1148,7 @@ files = [
name = "ipykernel"
version = "6.25.1"
description = "IPython Kernel for Jupyter"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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debugpy = ">=1.6.5"
ipython = ">=7.23.1"
jupyter-client = ">=6.1.12"
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
+jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
matplotlib-inline = ">=0.1"
nest-asyncio = "*"
packaging = "*"
@@ -932,6 +1182,7 @@ test = ["flaky", "ipyparallel", "pre-commit", "pytest (>=7.0)", "pytest-asyncio"
name = "ipynb"
version = "0.5.1"
description = "Package / Module importer for importing code from Jupyter Notebook files (.ipynb)"
+category = "main"
optional = false
python-versions = ">=3.4"
files = [
@@ -943,6 +1194,7 @@ files = [
name = "ipython"
version = "8.14.0"
description = "IPython: Productive Interactive Computing"
+category = "main"
optional = false
python-versions = ">=3.9"
files = [
@@ -981,6 +1233,7 @@ test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.21)", "pa
name = "ipython-genutils"
version = "0.2.0"
description = "Vestigial utilities from IPython"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -992,6 +1245,7 @@ files = [
name = "ipywidgets"
version = "8.1.0"
description = "Jupyter interactive widgets"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -1013,6 +1267,7 @@ test = ["ipykernel", "jsonschema", "pytest (>=3.6.0)", "pytest-cov", "pytz"]
name = "isoduration"
version = "20.11.0"
description = "Operations with ISO 8601 durations"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -1027,6 +1282,7 @@ arrow = ">=0.15.0"
name = "jedi"
version = "0.19.0"
description = "An autocompletion tool for Python that can be used for text editors."
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -1046,6 +1302,7 @@ testing = ["Django (<3.1)", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]
name = "jinja2"
version = "3.1.2"
description = "A very fast and expressive template engine."
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -1063,6 +1320,7 @@ i18n = ["Babel (>=2.7)"]
name = "joblib"
version = "1.3.2"
description = "Lightweight pipelining with Python functions"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -1074,6 +1332,7 @@ files = [
name = "json5"
version = "0.9.14"
description = "A Python implementation of the JSON5 data format."
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -1088,6 +1347,7 @@ dev = ["hypothesis"]
name = "jsonpointer"
version = "2.4"
description = "Identify specific nodes in a JSON document (RFC 6901)"
+category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
files = [
@@ -1099,6 +1359,7 @@ files = [
name = "jsonschema"
version = "4.19.0"
description = "An implementation of JSON Schema validation for Python"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -1128,6 +1389,7 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-
name = "jsonschema-specifications"
version = "2023.7.1"
description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "jupyter"
version = "1.0.0"
description = "Jupyter metapackage. Install all the Jupyter components in one go."
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -1162,6 +1425,7 @@ qtconsole = "*"
name = "jupyter-client"
version = "8.3.1"
description = "Jupyter protocol implementation and client libraries"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -1170,7 +1434,7 @@ files = [
]
[package.dependencies]
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+jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
python-dateutil = ">=2.8.2"
pyzmq = ">=23.0"
tornado = ">=6.2"
@@ -1184,6 +1448,7 @@ test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pyt
name = "jupyter-console"
version = "6.6.3"
description = "Jupyter terminal console"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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ipython = "*"
jupyter-client = ">=7.0.0"
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prompt-toolkit = ">=3.0.30"
pygments = "*"
pyzmq = ">=17"
@@ -1208,6 +1473,7 @@ test = ["flaky", "pexpect", "pytest"]
name = "jupyter-core"
version = "5.3.1"
description = "Jupyter core package. A base package on which Jupyter projects rely."
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -1228,6 +1494,7 @@ test = ["ipykernel", "pre-commit", "pytest", "pytest-cov", "pytest-timeout"]
name = "jupyter-events"
version = "0.7.0"
description = "Jupyter Event System library"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "jupyter-lsp"
version = "2.2.0"
description = "Multi-Language Server WebSocket proxy for Jupyter Notebook/Lab server"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "jupyter-server"
version = "2.7.3"
description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications."
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optional = false
python-versions = ">=3.8"
files = [
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argon2-cffi = "*"
jinja2 = "*"
jupyter-client = ">=7.4.4"
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
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jupyter-events = ">=0.6.0"
jupyter-server-terminals = "*"
nbconvert = ">=6.4.4"
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name = "jupyter-server-terminals"
version = "0.4.4"
description = "A Jupyter Server Extension Providing Terminals."
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "jupyterlab"
version = "4.0.5"
description = "JupyterLab computational environment"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "jupyterlab-pygments"
version = "0.2.2"
description = "Pygments theme using JupyterLab CSS variables"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "jupyterlab-server"
version = "2.24.0"
description = "A set of server components for JupyterLab and JupyterLab like applications."
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "jupyterlab-widgets"
version = "3.0.8"
description = "Jupyter interactive widgets for JupyterLab"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "kiwisolver"
version = "1.4.5"
description = "A fast implementation of the Cassowary constraint solver"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -1513,6 +1788,7 @@ files = [
name = "librosa"
version = "0.9.2"
description = "Python module for audio and music processing"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
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[package.extras]
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[[package]]
name = "llvmlite"
version = "0.39.1"
description = "lightweight wrapper around basic LLVM functionality"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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version = "1.2.4"
description = "A super-fast templating language that borrows the best ideas from the existing templating languages."
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "markupsafe"
version = "2.1.3"
description = "Safely add untrusted strings to HTML/XML markup."
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "matplotlib"
version = "3.7.2"
description = "Python plotting package"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "matplotlib-inline"
version = "0.1.6"
description = "Inline Matplotlib backend for Jupyter"
+category = "main"
optional = false
python-versions = ">=3.5"
files = [
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name = "mistune"
version = "3.0.1"
description = "A sane and fast Markdown parser with useful plugins and renderers"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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+category = "main"
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+python-versions = ">=3.7"
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name = "mypy-extensions"
version = "1.0.0"
description = "Type system extensions for programs checked with the mypy type checker."
+category = "main"
optional = false
python-versions = ">=3.5"
files = [
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name = "nbclient"
version = "0.8.0"
description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor."
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optional = false
python-versions = ">=3.8.0"
files = [
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[package.dependencies]
jupyter-client = ">=6.1.12"
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
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nbformat = ">=5.1"
traitlets = ">=5.4"
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name = "nbconvert"
version = "7.8.0"
description = "Converting Jupyter Notebooks"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -1813,6 +2182,7 @@ webpdf = ["playwright"]
name = "nbformat"
version = "5.9.2"
description = "The Jupyter Notebook format"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "nest-asyncio"
version = "1.5.7"
description = "Patch asyncio to allow nested event loops"
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optional = false
python-versions = ">=3.5"
files = [
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name = "notebook"
version = "7.0.3"
description = "Jupyter Notebook - A web-based notebook environment for interactive computing"
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optional = false
python-versions = ">=3.8"
files = [
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name = "notebook-shim"
version = "0.2.3"
description = "A shim layer for notebook traits and config"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "numba"
version = "0.56.4"
description = "compiling Python code using LLVM"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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]
[package.dependencies]
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+llvmlite = ">=0.39.0dev0,<0.40"
numpy = ">=1.18,<1.24"
setuptools = "*"
@@ -1927,6 +2301,7 @@ setuptools = "*"
name = "numpy"
version = "1.23.5"
description = "NumPy is the fundamental package for array computing with Python."
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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name = "oic"
version = "1.6.1"
description = "Python implementation of OAuth2 and OpenID Connect"
+category = "main"
optional = false
python-versions = "~=3.7"
files = [
@@ -1993,6 +2369,7 @@ types = ["types-requests"]
name = "overrides"
version = "7.4.0"
description = "A decorator to automatically detect mismatch when overriding a method."
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
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name = "packaging"
version = "23.1"
description = "Core utilities for Python packages"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "pandas"
version = "1.5.3"
description = "Powerful data structures for data analysis, time series, and statistics"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -2059,6 +2438,7 @@ test = ["hypothesis (>=5.5.3)", "pytest (>=6.0)", "pytest-xdist (>=1.31)"]
name = "pandocfilters"
version = "1.5.0"
description = "Utilities for writing pandoc filters in python"
+category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
files = [
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name = "papermill"
version = "2.4.0"
description = "Parametrize and run Jupyter and nteract Notebooks"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "parso"
version = "0.8.3"
description = "A Python Parser"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
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name = "pathspec"
version = "0.11.2"
description = "Utility library for gitignore style pattern matching of file paths."
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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version = "4.8.0"
description = "Pexpect allows easy control of interactive console applications."
+category = "main"
optional = false
python-versions = "*"
files = [
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name = "pickleshare"
version = "0.7.5"
description = "Tiny 'shelve'-like database with concurrency support"
+category = "main"
optional = false
python-versions = "*"
files = [
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name = "pillow"
version = "10.0.0"
description = "Python Imaging Library (Fork)"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
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@@ -2223,6 +2607,7 @@ tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "pa
name = "pip"
version = "23.2.1"
description = "The PyPA recommended tool for installing Python packages."
+category = "dev"
optional = false
python-versions = ">=3.7"
files = [
@@ -2234,6 +2619,7 @@ files = [
name = "platformdirs"
version = "3.10.0"
description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -2249,6 +2635,7 @@ test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4)", "pytest-co
name = "pluggy"
version = "1.3.0"
description = "plugin and hook calling mechanisms for python"
+category = "dev"
optional = false
python-versions = ">=3.8"
files = [
@@ -2264,6 +2651,7 @@ testing = ["pytest", "pytest-benchmark"]
name = "pooch"
version = "1.7.0"
description = "\"Pooch manages your Python library's sample data files: it automatically downloads and stores them in a local directory, with support for versioning and corruption checks.\""
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -2285,6 +2673,7 @@ xxhash = ["xxhash (>=1.4.3)"]
name = "prometheus-client"
version = "0.17.1"
description = "Python client for the Prometheus monitoring system."
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -2299,6 +2688,7 @@ twisted = ["twisted"]
name = "prompt-toolkit"
version = "3.0.39"
description = "Library for building powerful interactive command lines in Python"
+category = "main"
optional = false
python-versions = ">=3.7.0"
files = [
@@ -2313,6 +2703,7 @@ wcwidth = "*"
name = "psutil"
version = "5.9.5"
description = "Cross-platform lib for process and system monitoring in Python."
+category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
files = [
@@ -2339,6 +2730,7 @@ test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"]
name = "ptyprocess"
version = "0.7.0"
description = "Run a subprocess in a pseudo terminal"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -2350,6 +2742,7 @@ files = [
name = "pure-eval"
version = "0.2.2"
description = "Safely evaluate AST nodes without side effects"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -2364,6 +2757,7 @@ tests = ["pytest"]
name = "pyasn1"
version = "0.5.0"
description = "Pure-Python implementation of ASN.1 types and DER/BER/CER codecs (X.208)"
+category = "main"
optional = false
python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
files = [
@@ -2375,6 +2769,7 @@ files = [
name = "pycparser"
version = "2.21"
description = "C parser in Python"
+category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
files = [
@@ -2386,6 +2781,7 @@ files = [
name = "pycryptodomex"
version = "3.18.0"
description = "Cryptographic library for Python"
+category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
files = [
@@ -2427,6 +2823,7 @@ files = [
name = "pydantic"
version = "2.3.0"
description = "Data validation using Python type hints"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -2446,6 +2843,7 @@ email = ["email-validator (>=2.0.0)"]
name = "pydantic-core"
version = "2.6.3"
description = ""
+category = "main"
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python-versions = ">=3.7"
files = [
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name = "pydantic-settings"
version = "2.0.3"
description = "Settings management using Pydantic"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -2579,6 +2978,7 @@ python-dotenv = ">=0.21.0"
name = "pygments"
version = "2.16.1"
description = "Pygments is a syntax highlighting package written in Python."
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -2593,6 +2993,7 @@ plugins = ["importlib-metadata"]
name = "pyjwkest"
version = "1.4.2"
description = "Python implementation of JWT, JWE, JWS and JWK"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -2609,6 +3010,7 @@ six = "*"
name = "pyparsing"
version = "3.0.9"
description = "pyparsing module - Classes and methods to define and execute parsing grammars"
+category = "main"
optional = false
python-versions = ">=3.6.8"
files = [
@@ -2623,6 +3025,7 @@ diagrams = ["jinja2", "railroad-diagrams"]
name = "pytest"
version = "7.4.0"
description = "pytest: simple powerful testing with Python"
+category = "dev"
optional = false
python-versions = ">=3.7"
files = [
@@ -2645,6 +3048,7 @@ testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "no
name = "python-dateutil"
version = "2.8.2"
description = "Extensions to the standard Python datetime module"
+category = "main"
optional = false
python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
files = [
@@ -2659,6 +3063,7 @@ six = ">=1.5"
name = "python-dotenv"
version = "1.0.0"
description = "Read key-value pairs from a .env file and set them as environment variables"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -2673,6 +3078,7 @@ cli = ["click (>=5.0)"]
name = "python-jose"
version = "3.3.0"
description = "JOSE implementation in Python"
+category = "main"
optional = false
python-versions = "*"
files = [
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name = "python-json-logger"
version = "2.0.7"
description = "A python library adding a json log formatter"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -2705,6 +3112,7 @@ files = [
name = "python-keycloak"
version = "3.3.0"
description = "python-keycloak is a Python package providing access to the Keycloak API."
+category = "main"
optional = false
python-versions = ">=3.7,<4.0"
files = [
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name = "pytz"
version = "2023.3"
description = "World timezone definitions, modern and historical"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -2736,6 +3145,7 @@ files = [
name = "pywin32"
version = "306"
description = "Python for Window Extensions"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -2759,6 +3169,7 @@ files = [
name = "pywinpty"
version = "2.0.11"
description = "Pseudo terminal support for Windows from Python."
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -2773,6 +3184,7 @@ files = [
name = "pyyaml"
version = "6.0.1"
description = "YAML parser and emitter for Python"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -2822,6 +3234,7 @@ files = [
name = "pyzmq"
version = "25.1.1"
description = "Python bindings for 0MQ"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -2927,6 +3340,7 @@ cffi = {version = "*", markers = "implementation_name == \"pypy\""}
name = "qtconsole"
version = "5.4.3"
description = "Jupyter Qt console"
+category = "main"
optional = false
python-versions = ">= 3.7"
files = [
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name = "qtpy"
version = "2.4.0"
description = "Provides an abstraction layer on top of the various Qt bindings (PyQt5/6 and PySide2/6)."
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optional = false
python-versions = ">=3.7"
files = [
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name = "referencing"
version = "0.30.2"
description = "JSON Referencing + Python"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -2985,6 +3401,7 @@ rpds-py = ">=0.7.0"
name = "requests"
version = "2.31.0"
description = "Python HTTP for Humans."
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optional = false
python-versions = ">=3.7"
files = [
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name = "requests-toolbelt"
version = "1.0.0"
description = "A utility belt for advanced users of python-requests"
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optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
files = [
@@ -3020,6 +3438,7 @@ requests = ">=2.0.1,<3.0.0"
name = "resampy"
version = "0.4.2"
description = "Efficient signal resampling"
+category = "main"
optional = false
python-versions = "*"
files = [
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name = "rfc3339-validator"
version = "0.1.4"
description = "A pure python RFC3339 validator"
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optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
files = [
@@ -3054,6 +3474,7 @@ six = "*"
name = "rfc3986-validator"
version = "0.1.1"
description = "Pure python rfc3986 validator"
+category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
files = [
@@ -3065,6 +3486,7 @@ files = [
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version = "0.10.0"
description = "Python bindings to Rust's persistent data structures (rpds)"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -3171,6 +3593,7 @@ files = [
name = "rsa"
version = "4.9"
description = "Pure-Python RSA implementation"
+category = "main"
optional = false
python-versions = ">=3.6,<4"
files = [
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name = "scikit-learn"
version = "1.3.0"
description = "A set of python modules for machine learning and data mining"
+category = "main"
optional = false
python-versions = ">=3.8"
files = [
@@ -3227,6 +3651,7 @@ tests = ["black (>=23.3.0)", "matplotlib (>=3.1.3)", "mypy (>=1.3)", "numpydoc (
name = "scipy"
version = "1.11.2"
description = "Fundamental algorithms for scientific computing in Python"
+category = "main"
optional = false
python-versions = "<3.13,>=3.9"
files = [
@@ -3269,6 +3694,7 @@ test = ["asv", "gmpy2", "mpmath", "pooch", "pytest", "pytest-cov", "pytest-timeo
name = "send2trash"
version = "1.8.2"
description = "Send file to trash natively under Mac OS X, Windows and Linux"
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optional = false
python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
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name = "setuptools"
version = "68.1.2"
description = "Easily download, build, install, upgrade, and uninstall Python packages"
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optional = false
python-versions = ">=3.8"
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name = "six"
version = "1.16.0"
description = "Python 2 and 3 compatibility utilities"
+category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
files = [
@@ -3312,6 +3740,7 @@ files = [
name = "smmap"
version = "5.0.0"
description = "A pure Python implementation of a sliding window memory map manager"
+category = "main"
optional = false
python-versions = ">=3.6"
files = [
@@ -3323,6 +3752,7 @@ files = [
name = "sniffio"
version = "1.3.0"
description = "Sniff out which async library your code is running under"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
@@ -3334,6 +3764,7 @@ files = [
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version = "0.12.1"
description = "An audio library based on libsndfile, CFFI and NumPy"
+category = "main"
optional = false
python-versions = "*"
files = [
@@ -3357,6 +3788,7 @@ numpy = ["numpy"]
name = "soupsieve"
version = "2.4.1"
description = "A modern CSS selector implementation for Beautiful Soup."
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optional = false
python-versions = ">=3.7"
files = [
@@ -3368,6 +3800,7 @@ files = [
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version = "0.6.2"
description = "Extract data from python stack frames and tracebacks for informative displays"
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optional = false
python-versions = "*"
files = [
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name = "tenacity"
version = "8.2.3"
description = "Retry code until it succeeds"
+category = "main"
optional = false
python-versions = ">=3.7"
files = [
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name = "terminado"
version = "0.17.1"
description = "Tornado websocket backend for the Xterm.js Javascript terminal emulator library."
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optional = false
python-versions = ">=3.7"
files = [
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name = "textwrap3"
version = "0.9.2"
description = "textwrap from Python 3.6 backport (plus a few tweaks)"
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optional = false
python-versions = "*"
files = [
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version = "3.2.0"
description = "threadpoolctl"
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python-versions = ">=3.8"
files = [
@@ -3443,6 +3880,7 @@ files = [
name = "tinycss2"
version = "1.2.1"
description = "A tiny CSS parser"
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python-versions = ">=3.7"
files = [
@@ -3457,10 +3895,23 @@ webencodings = ">=0.4"
doc = ["sphinx", "sphinx_rtd_theme"]
test = ["flake8", "isort", "pytest"]
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description = "A lil' TOML parser"
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python-versions = ">=3.7"
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version = "6.3.3"
description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
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optional = false
python-versions = ">= 3.8"
files = [
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version = "4.66.1"
description = "Fast, Extensible Progress Meter"
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python-versions = ">=3.7"
files = [
@@ -3512,6 +3965,7 @@ telegram = ["requests"]
name = "traitlets"
version = "5.9.0"
description = "Traitlets Python configuration system"
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python-versions = ">=3.7"
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test = ["argcomplete (>=2.0)", "pre-commit", "pytest", "pytest-mock"]
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files = [
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version = "1.3.0"
description = "RFC 6570 URI Template Processor"
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python-versions = ">=3.7"
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version = "2.0.4"
description = "HTTP library with thread-safe connection pooling, file post, and more."
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name = "wcwidth"
version = "0.2.6"
description = "Measures the displayed width of unicode strings in a terminal"
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python-versions = "*"
files = [
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version = "1.13"
description = "A library for working with the color formats defined by HTML and CSS."
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python-versions = ">=3.7"
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name = "webencodings"
version = "0.5.1"
description = "Character encoding aliases for legacy web content"
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python-versions = "*"
files = [
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version = "1.6.2"
description = "WebSocket client for Python with low level API options"
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python-versions = ">=3.8"
files = [
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version = "4.0.8"
description = "Jupyter interactive widgets for Jupyter Notebook"
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python-versions = ">=3.7"
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+]
+
+[package.dependencies]
+idna = ">=2.0"
+multidict = ">=4.0"
+
[metadata]
lock-version = "2.0"
python-versions = "3.10.*"
-content-hash = "186a8d97c06e3cfd7299c00562f52d9f7e6774f4e16e49dddf10813ab56be4a1"
+content-hash = "0821c482ad42cd1b32b3a6dc4f836986f50ece1207603ac165337971c32ff626"
diff --git a/pyproject.toml b/pyproject.toml
index 3f2b05f1dea29207ede75eb1d201de910d34e4e1..a38b16056a8863c00f6c5f468c0a7579ff5188a4 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -23,6 +23,7 @@ papermill = "^2.4.0"
black = "^23.7.0"
oic = "^1.6.1"
python-keycloak = "^3.3.0"
+tuspy = "^1.0.1"
[tool.poetry.group.dev.dependencies]